CLUSTAL 2.1 multiple sequence alignment NCBI_gi_157310886_270_p1 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_270_p1 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_268_p2 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_266_p3 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_227_p4 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_260_p5 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_268_p6 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_267_p7 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_258_p8 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_269_p9 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_266_p10 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_266_p11 TTTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_272_p12 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 SSR_ZA12_CONTIG_220_p13 TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50 * ************************************************ NCBI_gi_157310886_270_p1 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_270_p1 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_268_p2 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_266_p3 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_227_p4 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_260_p5 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCC- 99 SSR_ZA12_CONTIG_268_p6 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCT 100 SSR_ZA12_CONTIG_267_p7 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_258_p8 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCC- 99 SSR_ZA12_CONTIG_269_p9 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_266_p10 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_266_p11 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_272_p12 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 SSR_ZA12_CONTIG_220_p13 TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100 ************************************************* NCBI_gi_157310886_270_p1 TGA--GAGACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 148 SSR_ZA12_CONTIG_270_p1 TGA--GAGACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 148 SSR_ZA12_CONTIG_268_p2 T----GAGACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 146 SSR_ZA12_CONTIG_266_p3 TG------ACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 144 SSR_ZA12_CONTIG_227_p4 T--------------------------------GAGTTTC---------- 108 SSR_ZA12_CONTIG_260_p5 -----------GTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 138 SSR_ZA12_CONTIG_268_p6 T----GAGACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 146 SSR_ZA12_CONTIG_267_p7 TGC-----ACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 145 SSR_ZA12_CONTIG_258_p8 -------------CTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 136 SSR_ZA12_CONTIG_269_p9 TGA---AGACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 147 SSR_ZA12_CONTIG_266_p10 ------AGACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 144 SSR_ZA12_CONTIG_266_p11 TG------ACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 144 SSR_ZA12_CONTIG_272_p12 TTTCTGAGACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCA 150 SSR_ZA12_CONTIG_220_p13 T--------------------------------GA--------------- 103 ** NCBI_gi_157310886_270_p1 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 198 SSR_ZA12_CONTIG_270_p1 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 198 SSR_ZA12_CONTIG_268_p2 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 196 SSR_ZA12_CONTIG_266_p3 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 194 SSR_ZA12_CONTIG_227_p4 ---AGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 155 SSR_ZA12_CONTIG_260_p5 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 188 SSR_ZA12_CONTIG_268_p6 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 196 SSR_ZA12_CONTIG_267_p7 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 195 SSR_ZA12_CONTIG_258_p8 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 186 SSR_ZA12_CONTIG_269_p9 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 197 SSR_ZA12_CONTIG_266_p10 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 194 SSR_ZA12_CONTIG_266_p11 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 194 SSR_ZA12_CONTIG_272_p12 AAGAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 200 SSR_ZA12_CONTIG_220_p13 -----CTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAA 148 ********************************************* NCBI_gi_157310886_270_p1 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 248 SSR_ZA12_CONTIG_270_p1 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 248 SSR_ZA12_CONTIG_268_p2 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 246 SSR_ZA12_CONTIG_266_p3 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 244 SSR_ZA12_CONTIG_227_p4 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 205 SSR_ZA12_CONTIG_260_p5 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 238 SSR_ZA12_CONTIG_268_p6 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 246 SSR_ZA12_CONTIG_267_p7 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 245 SSR_ZA12_CONTIG_258_p8 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 236 SSR_ZA12_CONTIG_269_p9 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 247 SSR_ZA12_CONTIG_266_p10 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 244 SSR_ZA12_CONTIG_266_p11 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 244 SSR_ZA12_CONTIG_272_p12 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 250 SSR_ZA12_CONTIG_220_p13 CAAGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAG 198 ************************************************** NCBI_gi_157310886_270_p1 AATAGCCTGAATGCAAGACCCA 270 SSR_ZA12_CONTIG_270_p1 AATAGCCTGAATGCAAGACCCA 270 SSR_ZA12_CONTIG_268_p2 AATAGCCTGAATGCAAGACCCA 268 SSR_ZA12_CONTIG_266_p3 AATAGCCTGAATGCAAGACCCA 266 SSR_ZA12_CONTIG_227_p4 AATAGCCTGAATGCAAGACCCA 227 SSR_ZA12_CONTIG_260_p5 AATAGCCTGAATGCAAGACCCA 260 SSR_ZA12_CONTIG_268_p6 AATAGCCTGAATGCAAGACCCA 268 SSR_ZA12_CONTIG_267_p7 AATAGCCTGAATGCAAGACCCA 267 SSR_ZA12_CONTIG_258_p8 AATAGCCTGAATGCAAGACCCA 258 SSR_ZA12_CONTIG_269_p9 AATAGCCTGAATGCAAGACCCA 269 SSR_ZA12_CONTIG_266_p10 AATAGCCTGAATGCAAGACCCA 266 SSR_ZA12_CONTIG_266_p11 AATAGCCTGAATGCAAGACCCA 266 SSR_ZA12_CONTIG_272_p12 AATAGCCTGAATGCAAGACCCA 272 SSR_ZA12_CONTIG_220_p13 AATAGCCTGAATGCAAGACCCA 220 **********************